PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_3AL_C5E13251D.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 105aa    MW: 11928.5 Da    PI: 11.5253
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_3AL_C5E13251D.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.96.6e-112862438
                           XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38
                           +k err+++NReAA++sR+RKka++++Le+    L
  Traes_3AL_C5E13251D.1 28 SKTERRLAQNREAAKKSRLRKKAYVQNLETSRVRL 62
                           799*************************9854444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-625103IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.9E-82771No hitNo description
PROSITE profilePS502179.2892771IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.13E-82872No hitNo description
PfamPF001702.7E-82964IPR004827Basic-leucine zipper domain
PROSITE patternPS0003603247IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    Send to blast
LRTSFFPLVS FAQRKHGSTR KDGKLVDSKT ERRLAQNREA AKKSRLRKKA YVQNLETSRV  60
RLQQMEQELQ RARSQGIFLG GGGAGGDMSP GNQRRSSELF YSDHC
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX4243221e-123JX424322.1 Triticum urartu basic leucine zipper protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006645055.11e-39PREDICTED: transcription factor TGA2-like isoform X2
SwissprotP432732e-23TGA2_ARATH; Transcription factor TGA2
TrEMBLW5CGJ78e-72W5CGJ7_WHEAT; Uncharacterized protein
STRINGMLOC_65998.33e-43(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2537845
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.27e-21bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]